Gen*NY*sis Center for Excellence in Cancer Genomics

University at Albany

Laboratory for Computational Genomics (LCG)

Principal Investigator: Igor B. Kuznetsov

Lab's main web-site: http://www.albany.edu/cancergenomics/people/kuznetsov.html

This web-server provides access to the following resources developed in our lab:

• BIAS, software and web-server for the identification of user-defined types of compositional bias in biological sequences

Source code and binaries: http://lcg.rit.albany.edu/bias/
Web-version: http://lcg.rit.albany.edu/ProBias/

• DP-BIND, a web-server for consensus prediction of DNA-binding sites in DNA-binding proteins

The server uses a protein sequence to run three prediction methods and calculates a consensus prediction:
http://lcg.rit.albany.edu/dp-bind/

• CFP, a web-server for the identification of protein segments with high backbone flexibility

The server uses a protein sequence to identify potential conformationally flexible segments:
http://lcg.rit.albany.edu/cfp/

• The FlexProt dataset used in: I.B.Kuznetsov (2008) Ordered conformational change in the protein backbone: prediction of conformationally variable positions from sequence and low-resolution structural data. Proteins: Structure, Function and Bioinformatics (in press)

Click here to download FlexProt: http://lcg.rit.albany.edu/flexprot/